Transcript: ENST00000303406.4 HOXC4-001

Description

homeobox C4 [Source:HGNC Symbol;Acc:5126]

Gene Synonyms

HOX3, HOX3E, cp19

Location

About this transcript

This transcript has 4 exons, is annotated with 17 domains and features, is associated with 18506 variant alleles and maps to 230 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000609810.1	HOXC4-201	1665	264aa	ENSP00000477362.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8873	-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000303406.4	HOXC4-001	1524	264aa	ENSP00000305973.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8873	P09017	NM_014620.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000507650.1	HOXC4-002	575	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 1,524 bps, Translation length: 264 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P09017

CCDS

This transcript is a member of the Human CCDS set: CCDS8873

Version

ENST00000303406.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000358964 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.