Transcript: ENST00000573359.1 ALOX15B-005

Description

arachidonate 15-lipoxygenase, type B [Source:HGNC Symbol;Acc:434]

Gene Synonyms

15-LOX-2

Location

About this transcript

This transcript has 12 exons, is annotated with 26 domains and features, is associated with 5488 variant alleles and maps to 492 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000380183.4	ALOX15B-001	2739	676aa	ENSP00000369530.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11128	O15296	NM_001141.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000380173.2	ALOX15B-201	2605	647aa	ENSP00000369520.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32558	O15296	NM_001039131.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000572022.1	ALOX15B-002	2396	664aa	ENSP00000458749.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L1D5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000573359.1	ALOX15B-005	1809	602aa	ENSP00000460332.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32559	O15296	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000571240.1	ALOX15B-004	2944	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 1,809 bps, Translation length: 602 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O15296

CCDS

This transcript is a member of the Human CCDS set: CCDS32559

Version

ENST00000573359.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000441175 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.