Transcript: ALOX15B-004 ENST00000571240.1

Description

arachidonate 15-lipoxygenase, type B [Source:HGNC Symbol;Acc:434]

Gene Synonyms

15-LOX-2

Location

Chromosome 17: 7,942,419-7,952,452 forward strand.

About this transcript

This transcript has 13 exons, is associated with 3662 variant alleles and maps to 523 oligo probes.

Gene

This transcript is a product of gene ENSG00000179593.11 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ALOX15B-001	ENST00000380183.4	2739	676aa	ENSP00000369530.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11128	O15296	NM_001141 NP_001132	The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic,
ALOX15B-201	ENST00000380173.2	2605	647aa	ENSP00000369520.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32558	O15296	NM_001039130 NM_001039131 NP_001034219 NP_001034220	The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic,
ALOX15B-005	ENST00000573359.1	1809	602aa	ENSP00000460332.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32559	O15296	-	The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic,
ALOX15B-002	ENST00000572022.1	2396	664aa	ENSP00000458749.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	I3L1D5	-	The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic,
ALOX15B-004	ENST00000571240.1	2944	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-	-

Summary

Statistics

Exons: 13, Coding exons: 0, Transcript length: 2,944 bps,

Version

ENST00000571240.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000441174 (version 1)

Favourite species

All species

Recent locations

Transcript: ALOX15B-004 ENST00000571240.1

Summary

Transcript-based displays