Transcript: ENST00000321196.3 TMTC2-002

Description

transmembrane and tetratricopeptide repeat containing 2 [Source:HGNC Symbol;Acc:25440]

Gene Synonyms

DKFZp762A217, IBDBP1

Location

About this transcript

This transcript has 12 exons, is annotated with 46 domains and features, is associated with 195677 variant alleles and maps to 546 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000549919.1	TMTC2-003	6211	830aa	ENSP00000447609.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000321196.3	TMTC2-002	5681	836aa	ENSP00000322300.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9025	Q8N394	NM_152588.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000548305.1	TMTC2-004	2678	637aa	ENSP00000448292.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VSH2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000546590.2	TMTC2-005	4527	35aa	ENSP00000448630.2	Nonsense mediated decay		F8VRQ2	-	-
ENST00000551915.1	TMTC2-001	3304	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 5,681 bps, Translation length: 836 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8N394

CCDS

This transcript is a member of the Human CCDS set: CCDS9025

Version

ENST00000321196.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000405663 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.