Transcript: ENST00000312106.5 CATSPER1-001

Description

cation channel, sperm associated 1 [Source:HGNC Symbol;Acc:17116]

Gene Synonyms

CATSPER, SPGF7

Location

About this transcript

This transcript has 12 exons, is annotated with 18 domains and features, is associated with 5361 variant alleles and maps to 440 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000312106.5	CATSPER1-001	2619	780aa	ENSP00000309052.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8127	Q8NEC5	NM_053054.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000529244.1	CATSPER1-002	720	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 2,619 bps, Translation length: 780 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8NEC5

CCDS

This transcript is a member of the Human CCDS set: CCDS8127

Version

ENST00000312106.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000391055 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.