Transcript: ENST00000358141.2 LRRC20-002

Description

leucine rich repeat containing 20 [Source:HGNC Symbol;Acc:23421]

Gene Synonyms

FLJ10751, FLJ10844

Location

Chromosome 10: 72,058,732-72,142,382 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 5 domains and features, is associated with 34685 variant alleles and maps to 232 oligo probes.

Gene

This transcript is a product of gene ENSG00000172731.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000355790.4	LRRC20-004	3414	184aa	ENSP00000348043.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7302	Q8TCA0	NM_207119.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000373224.1	LRRC20-001	3095	184aa	ENSP00000362321.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7302	Q8TCA0	NM_001278214.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000395011.1	LRRC20-202	3008	134aa	ENSP00000378458.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7301	Q8TCA0	NM_001278213.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000395010.1	LRRC20-201	2990	128aa	ENSP00000378457.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7300	Q8TCA0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000358141.2	LRRC20-002	2924	134aa	ENSP00000350860.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7301	Q8TCA0	NM_018239.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000357631.2	LRRC20-005	2906	128aa	ENSP00000350255.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7300	Q8TCA0	-	-
ENST00000446961.1	LRRC20-003	663	174aa	ENSP00000413745.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 2,924 bps, Translation length: 134 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8TCA0

CCDS

This transcript is a member of the Human CCDS set: CCDS7301

Version

ENST00000358141.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000048508 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000358141.2 LRRC20-002

Summary