Transcript: ENST00000307980.2 RAD9A-001

Description

RAD9 homolog A (S. pombe) [Source:HGNC Symbol;Acc:9827]

Gene Synonyms

RAD9

Location

Chromosome 11: 67,159,423-67,165,880 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 8 domains and features, is associated with 3880 variant alleles and maps to 517 oligo probes.

Gene

This transcript is a product of gene ENSG00000172613.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000307980.2	RAD9A-001	2119	391aa	ENSP00000311360.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8159	C4TNW7 C4TNW8 Q99638	NM_004584.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000544620.1	RAD9A-007	829	247aa	ENSP00000444979.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C4TNW7 F5H4F1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000538013.1	RAD9A-004	924	49aa	ENSP00000442064.1	Nonsense mediated decay		F5H8A2	-	-
ENST00000542139.1	RAD9A-006	578	118aa	ENSP00000445137.1	Nonsense mediated decay		C4TNW7 C4TNW8 F5H492	-	-
ENST00000535644.1	RAD9A-009	1624	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000529100.1	RAD9A-003	1037	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000543808.1	RAD9A-005	822	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000530934.1	RAD9A-002	1256	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000541132.1	RAD9A-008	586	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 2,119 bps, Translation length: 391 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q99638

CCDS

This transcript is a member of the Human CCDS set: CCDS8159

Version

ENST00000307980.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000395481 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000307980.2 RAD9A-001

Summary