Transcript: ENST00000397505.2 MRPL52-005

Description

mitochondrial ribosomal protein L52 [Source:HGNC Symbol;Acc:16655]

Location

Chromosome 14: 23,299,122-23,303,556 forward strand.

About this transcript

This transcript has 4 exons, is associated with 2022 variant alleles and maps to 212 oligo probes.

Gene

This transcript is a product of gene ENSG00000172590.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000355151.5	MRPL52-003	1118	123aa	ENSP00000347277.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41917	Q86TS9	NM_181306.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397496.3	MRPL52-001	1111	122aa	ENSP00000380633.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9575	Q86TS9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000311892.6	MRPL52-017	1042	52aa	ENSP00000310762.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6NLB9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000557221.1	MRPL52-019	922	51aa	ENSP00000451436.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V3U6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000555345.1	MRPL52-018	895	64aa	ENSP00000451081.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41918	Q86TS9	NM_181305.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000553711.1	MRPL52-016	586	64aa	ENSP00000451303.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41918	Q86TS9	NM_181304.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000555536.1	MRPL52-015	451	52aa	ENSP00000451809.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V4H9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000432849.3	MRPL52-014	411	110aa	ENSP00000406655.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V4H9 G5E9P5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000556840.1	MRPL52-020	398	64aa	ENSP00000451481.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41918	Q86TS9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397505.2	MRPL52-005	333	87aa	ENSP00000380642.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9576	A8MXK5	NM_181307.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000556465.1	MRPL52-006	220	72aa	ENSP00000451832.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V4J1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000461594.1	MRPL52-004	375	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000556654.1	MRPL52-013	362	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000557543.1	MRPL52-007	2020	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000553482.1	MRPL52-012	595	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000556214.1	MRPL52-011	579	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000553965.1	MRPL52-009	327	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 333 bps, Translation length: 87 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS9576

Version

ENST00000397505.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000071659 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000397505.2 MRPL52-005

Summary