Transcript: AGPAT2-004 ENST00000472820.1

Description

1-acylglycerol-3-phosphate O-acyltransferase 2 [Source:HGNC Symbol;Acc:325]

Gene Synonyms

1-AGPAT2, BSCL, BSCL1, LPAAB, LPAAT-beta

Location

Chromosome 9: 139,568,161-139,571,832 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 1477 variant alleles and maps to 443 oligo probes.

Gene

This transcript is a product of gene ENSG00000169692.8 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
AGPAT2-001	ENST00000371696.2	1512	278aa	ENSP00000360761.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7003	O15120 Q8WUW2	NM_006412 NP_006403	The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic,
AGPAT2-002	ENST00000371694.3	1391	246aa	ENSP00000360759.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35181	O15120	NM_001012727 NP_001012745	The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic,
AGPAT2-201	ENST00000538402.1	1357	278aa	ENSP00000438919.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7003	O15120 Q8WUW2	-	The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic,
AGPAT2-004	ENST00000472820.1	808	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-	-
AGPAT2-003	ENST00000470861.1	720	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 808 bps,

Version

ENST00000472820.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000319124 (version 1)

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Recent locations

Transcript: AGPAT2-004 ENST00000472820.1

Summary

Transcript-based displays