Transcript: ENST00000293217.5 ACOX1-001

Description

acyl-CoA oxidase 1, palmitoyl [Source:HGNC Symbol;Acc:119]

Gene Synonyms

ACOX, PALMCOX, SCOX

Location

Chromosome 17: 73,937,588-73,975,444 reverse strand.

About this transcript

This transcript has 14 exons, is annotated with 13 domains and features, is associated with 18432 variant alleles and maps to 823 oligo probes.

Gene

This transcript is a product of gene ENSG00000161533.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000537812.1	ACOX1-201	7751	622aa	ENSP00000441257.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q15067	NM_001185039.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000293217.5	ACOX1-001	7514	660aa	ENSP00000293217.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11734	Q15067	NM_004035.6	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000301608.4	ACOX1-002	2215	660aa	ENSP00000301608.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11735	Q15067	NM_007292.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000587927.1	ACOX1-009	775	132aa	ENSP00000466921.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000588968.1	ACOX1-014	706	153aa	ENSP00000468651.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000576743.1	ACOX1-005	637	108aa	ENSP00000461486.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000588176.1	ACOX1-012	574	156aa	ENSP00000466210.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ELT1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000572047.1	ACOX1-004	2441	71aa	ENSP00000459936.1	Nonsense mediated decay		I3L2U4	-	-
ENST00000573078.1	ACOX1-003	2417	223aa	ENSP00000458325.1	Nonsense mediated decay		I3L0T4	-	-
ENST00000589301.1	ACOX1-007	550	71aa	ENSP00000468435.1	Nonsense mediated decay		I3L2U4	-	-
ENST00000591857.1	ACOX1-010	681	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000591963.1	ACOX1-013	388	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000589744.1	ACOX1-011	396	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000592329.1	ACOX1-008	308	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 7,514 bps, Translation length: 660 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q15067

CCDS

This transcript is a member of the Human CCDS set: CCDS11734

Version

ENST00000293217.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000439500 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000293217.5 ACOX1-001

Summary