Human (GRCh37.p13)
Description

sequestosome 1 [Source:HGNC Symbol;Acc:11280]

Gene Synonyms

A170, ORCA, OSIL, PDB3, ZIP3, p60, p62, p62B

About this transcript

This transcript has 8 exons, is annotated with 17 domains and features, is associated with 11290 variant alleles and maps to 623 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeqFlags
ENST00000389805.4SQSTM1-0012986440aaENSP00000374455.4
 
Protein coding
CCDS34317C9JRJ8 E9PFW8 Q13501
NM_003900.4GENCODE basic
ENST00000376929.3SQSTM1-2012913356aaENSP00000366128.3
 
Protein coding
CCDS47355C9JRJ8 E9PFW8 Q13501
NM_001142299.1GENCODE basic
ENST00000360718.5SQSTM1-0022253356aaENSP00000353944.5
 
Protein coding
CCDS47355C9JRJ8 E9PFW8 Q13501
-GENCODE basic
ENST00000402874.3SQSTM1-2022000356aaENSP00000385553.3
 
Protein coding
CCDS47355C9JRJ8 E9PFW8 Q13501
-GENCODE basic
ENST00000510187.1SQSTM1-0131714378aaENSP00000424477.1
 
Protein coding
C9JRJ8 E7EMC7 E9PFW8
-GENCODE basic
ENST00000514093.1SQSTM1-015842167aaENSP00000427308.1
 
Protein coding
C9JRJ8 E9PFW8 -CDS 3' incomplete
ENST00000422245.1SQSTM1-003628140aaENSP00000394534.1
 
Protein coding
C9JRJ8 -CDS 3' incomplete
ENST00000504627.1SQSTM1-017602190aaENSP00000425957.1
 
Protein coding
E3W990 -CDS 3' incomplete
ENST00000508284.1SQSTM1-01657869aaENSP00000424195.1
 
Nonsense mediated decay
D6RBF1 --
ENST00000453046.1SQSTM1-00857273aaENSP00000405061.1
 
Nonsense mediated decay
C9J6J8 D6RBF1 --
ENST00000506690.1SQSTM1-0102405No protein-
 
Processed transcript
---
ENST00000512234.1SQSTM1-0111722No protein-
 
Processed transcript
---
ENST00000506042.1SQSTM1-014921No protein-
 
Processed transcript
---
ENST00000481335.1SQSTM1-004562No protein-
 
Processed transcript
---
ENST00000464493.1SQSTM1-005532No protein-
 
Processed transcript
---
ENST00000466342.1SQSTM1-007808No protein-
 
Retained intron
---
ENST00000485412.1SQSTM1-006656No protein-
 
Retained intron
---
Statistics

Exons: 8, Coding exons: 8, Transcript length: 2,986 bps, Translation length: 440 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q13501

CCDS

This transcript is a member of the Human CCDS set: CCDS34317

Version

ENST00000389805.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:
OTTHUMT00000319344 (version 1)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.