Transcript: ENST00000527342.1 CREB3L1-004

Description

cAMP responsive element binding protein 3-like 1 [Source:HGNC Symbol;Acc:18856]

Gene Synonyms

OASIS

Location

Chromosome 11: 46,332,465-46,334,174 forward strand.

About this transcript

This transcript has 3 exons, is associated with 829 variant alleles and maps to 84 oligo probes.

Gene

This transcript is a product of gene ENSG00000157613.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000529193.1	CREB3L1-001	2687	519aa	ENSP00000434939.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53620	E9PK33 Q96BA8	NM_052854.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000288400.3	CREB3L1-201	2669	519aa	ENSP00000288400.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PK33 Q96BA8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000534787.1	CREB3L1-003	561	105aa	ENSP00000431677.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PK33	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000530518.1	CREB3L1-005	528	123aa	ENSP00000436574.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YEU7	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000534616.1	CREB3L1-006	765	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000530244.1	CREB3L1-002	1817	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000527342.1	CREB3L1-004	438	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 438 bps,

Version

ENST00000527342.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000389724 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000527342.1 CREB3L1-004

Summary