Transcript: ENST00000396396.1 PGM5-001

Description

phosphoglucomutase 5 [Source:HGNC Symbol;Acc:8908]

Gene Synonyms

PGMRP

Location

About this transcript

This transcript has 11 exons, is annotated with 19 domains and features, is associated with 74800 variant alleles and maps to 893 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000396396.1	PGM5-001	3338	567aa	ENSP00000379678.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6622	Q15124	NM_021965.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396392.1	PGM5-004	1782	387aa	ENSP00000379674.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q15124	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000431583.1	PGM5-003	616	205aa	ENSP00000394864.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5JTY7	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000604870.2	PGM5-006	1699	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000587852.2	PGM5-007	599	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472639.1	PGM5-002	571	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000496758.1	PGM5-005	4032	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 3,338 bps, Translation length: 567 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q15124

CCDS

This transcript is a member of the Human CCDS set: CCDS6622

Version

ENST00000396396.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000052548 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.