Transcript: ENST00000281623.3 FBXO4-001

Description

F-box protein 4 [Source:HGNC Symbol;Acc:13583]

Gene Synonyms

FBX4

Location

About this transcript

This transcript has 7 exons, is annotated with 9 domains and features, is associated with 7153 variant alleles and maps to 329 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000296812.2	FBXO4-002	1731	307aa	ENSP00000296812.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3939	Q9UKT5	NM_033484.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000281623.3	FBXO4-001	1682	387aa	ENSP00000281623.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3938	Q9UKT5	NM_012176.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000509134.1	FBXO4-003	1284	305aa	ENSP00000421749.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RAJ6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000504463.1	FBXO4-007	831	154aa	ENSP00000424991.1	Nonsense mediated decay		D6REP2	-	-
ENST00000513496.1	FBXO4-006	719	64aa	ENSP00000424750.1	Nonsense mediated decay		D6RAU6	-	-
ENST00000505566.1	FBXO4-004	698	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000506496.1	FBXO4-005	637	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,682 bps, Translation length: 387 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UKT5

CCDS

This transcript is a member of the Human CCDS set: CCDS3938

Version

ENST00000281623.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000211614 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.