Transcript: ENST00000544334.2 RPTOR-006

Description

regulatory associated protein of MTOR, complex 1 [Source:HGNC Symbol;Acc:30287]

Gene Synonyms

KIAA1303, KOG1, Mip1, RAPTOR, raptor

Location

Chromosome 17: 78,519,268-78,940,168 forward strand.

About this transcript

This transcript has 30 exons, is annotated with 32 domains and features, is associated with 201145 variant alleles and maps to 700 oligo probes.

Gene

This transcript is a product of gene ENSG00000141564.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000306801.3	RPTOR-001	6408	1335aa	ENSP00000307272.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11773	Q6DKI0 Q8N122	NM_020761.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000544334.2	RPTOR-006	5734	1177aa	ENSP00000442479.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54175	C6KEF2 F5H7J5 Q6DKI0	NM_001163034.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000537330.1	RPTOR-201	2461	329aa	ENSP00000440947.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GXV9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000570891.1	RPTOR-005	2286	379aa	ENSP00000460136.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8N122	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000576366.1	RPTOR-011	787	235aa	ENSP00000460940.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L436	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000574767.1	RPTOR-004	2461	95aa	ENSP00000459701.1	Nonsense mediated decay		I3L2I3	-	-
ENST00000575542.1	RPTOR-002	5536	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000577161.1	RPTOR-003	3633	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000573746.1	RPTOR-007	688	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000573163.1	RPTOR-010	501	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000572733.1	RPTOR-008	424	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000573837.1	RPTOR-009	443	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 30, Coding exons: 30, Transcript length: 5,734 bps, Translation length: 1,177 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS54175

Version

ENST00000544334.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000438129 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Recent locations

Transcript: ENST00000544334.2 RPTOR-006

Summary