Transcript: ENST00000317594.6 FXYD2-003

Description

FXYD domain containing ion transport regulator 2 [Source:HGNC Symbol;Acc:4026]

Gene Synonyms

ATP1C, ATP1G1, HOMG2, MGC12372

Location

Chromosome 11: 117,691,957-117,695,459 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 1685 variant alleles and maps to 250 oligo probes.

Gene

This transcript is a product of gene ENSG00000137731.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000528014.1	FXYD2-004	672	64aa	ENSP00000432430.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8385	P54710	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000292079.2	FXYD2-002	571	66aa	ENSP00000292079.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8386	P54710	NM_001680.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000532119.1	FXYD2-005	562	64aa	ENSP00000436414.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8385	P54710	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000260287.2	FXYD2-001	513	64aa	ENSP00000260287.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8385	P54710	NM_021603.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000514385.1	FXYD2-008	2872	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000317594.6	FXYD2-003	1567	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000534383.1	FXYD2-006	991	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000533281.1	FXYD2-007	375	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 1,567 bps,

Version

ENST00000317594.6

Type

Retained intron

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000390055 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000317594.6 FXYD2-003

Summary