Transcript: ENST00000254286.4 ACTR10-002

Description

actin-related protein 10 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:17372]

Gene Synonyms

ACTR11, ARP11, Arp11, HARP11

Location

Chromosome 14: 58,666,856-58,701,750 forward strand.

About this transcript

This transcript has 13 exons, is annotated with 8 domains and features, is associated with 15041 variant alleles and maps to 453 oligo probes.

Gene

This transcript is a product of gene ENSG00000131966.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000254286.4	ACTR10-002	1815	417aa	ENSP00000254286.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32090	Q86SY7 Q9NZ32	NM_018477.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000554642.1	ACTR10-011	687	149aa	ENSP00000451289.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000545307.2	ACTR10-001	1602	185aa	ENSP00000438183.2	Nonsense mediated decay		F6S9Y6	-	-
ENST00000554402.2	ACTR10-018	1544	302aa	ENSP00000477173.1	Nonsense mediated decay		Q86TY2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000555229.1	ACTR10-017	1517	179aa	ENSP00000452586.1	Nonsense mediated decay		G3V5Y4	-	-
ENST00000553907.1	ACTR10-021	780	35aa	ENSP00000451336.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000555337.1	ACTR10-014	705	126aa	ENSP00000450796.1	Nonsense mediated decay		G3V2Q5	-	-
ENST00000556748.1	ACTR10-005	603	43aa	ENSP00000451863.1	Nonsense mediated decay		G3V4K6	-	-
ENST00000556243.1	ACTR10-003	484	90aa	ENSP00000452135.1	Nonsense mediated decay		G3V524	-	-
ENST00000557711.1	ACTR10-006	1584	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000556694.1	ACTR10-012	625	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000556312.1	ACTR10-004	540	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000557583.1	ACTR10-008	523	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000554790.1	ACTR10-019	499	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000556449.1	ACTR10-009	489	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000555965.1	ACTR10-020	462	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 1,815 bps, Translation length: 417 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NZ32

CCDS

This transcript is a member of the Human CCDS set: CCDS32090

Version

ENST00000254286.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000411405 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000254286.4 ACTR10-002

Summary