Transcript: ENST00000556731.1 AJUBA-005

Description

ajuba LIM protein [Source:HGNC Symbol;Acc:20250]

Gene Synonyms

JUB, MGC15563

Location

Chromosome 14: 23,443,256-23,446,946 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 7 domains and features, is associated with 1586 variant alleles and maps to 129 oligo probes.

Gene

This transcript is a product of gene ENSG00000129474.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000262713.2	AJUBA-001	4262	538aa	ENSP00000262713.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9581	G3V481 G3V5F5 Q96IF1	NM_032876.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397388.3	AJUBA-002	2648	121aa	ENSP00000380543.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9582	G3V481 G3V5F5 Q96IF1	NM_198086.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000361265.4	AJUBA-201	2569	538aa	ENSP00000354491.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9581	G3V481 G3V5F5 Q96IF1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000553736.1	AJUBA-004	751	143aa	ENSP00000451772.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000556731.1	AJUBA-005	651	80aa	ENSP00000451649.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V481 G3V5F5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000553911.1	AJUBA-006	567	64aa	ENSP00000452325.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V5F5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000553592.1	AJUBA-008	418	80aa	ENSP00000452369.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V481 G3V5F5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000555479.1	AJUBA-007	558	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 3, Transcript length: 651 bps, Translation length: 80 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000556731.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000413453 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000556731.1 AJUBA-005

Summary