Transcript: ENST00000397388.3 AJUBA-002

Description

ajuba LIM protein [Source:HGNC Symbol;Acc:20250]

Gene Synonyms

JUB, MGC15563

Location

Chromosome 14: 23,441,024-23,446,432 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 10 domains and features, is associated with 2292 variant alleles and maps to 437 oligo probes.

Gene

This transcript is a product of gene ENSG00000129474.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000262713.2	AJUBA-001	4262	538aa	ENSP00000262713.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9581	G3V481 G3V5F5 Q96IF1	NM_032876.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397388.3	AJUBA-002	2648	121aa	ENSP00000380543.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9582	G3V481 G3V5F5 Q96IF1	NM_198086.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000361265.4	AJUBA-201	2569	538aa	ENSP00000354491.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9581	G3V481 G3V5F5 Q96IF1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000553736.1	AJUBA-004	751	143aa	ENSP00000451772.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000556731.1	AJUBA-005	651	80aa	ENSP00000451649.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V481 G3V5F5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000553911.1	AJUBA-006	567	64aa	ENSP00000452325.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V5F5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000553592.1	AJUBA-008	418	80aa	ENSP00000452369.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V481 G3V5F5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000555479.1	AJUBA-007	558	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 4, Transcript length: 2,648 bps, Translation length: 121 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96IF1

CCDS

This transcript is a member of the Human CCDS set: CCDS9582

Version

ENST00000397388.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000257240 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000397388.3 AJUBA-002

Summary