Human (GRCh37.p13)
Description

calmodulin-like 4 [Source:HGNC Symbol;Acc:18445]

Gene Synonyms

MGC4809, NY-BR-20

Location
About this transcript

This transcript has 4 exons, is annotated with 8 domains and features, is associated with 6634 variant alleles and maps to 455 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeqFlags
ENST00000395465.3CALML4-002415559aaENSP00000378848.3
 
Protein coding
Q6MZY3 -GENCODE basic
ENST00000448060.2CALML4-0032520149aaENSP00000400755.2
 
Protein coding
CCDS42052Q96GE6 NM_001031733.2GENCODE basic
ENST00000540479.1CALML4-2011445120aaENSP00000438177.1
 
Protein coding
CCDS66808H3BS46 Q96GE6 NM_001286694.1GENCODE basic
ENST00000467889.1CALML4-001987196aaENSP00000419081.1
 
Protein coding
CCDS10226H3BS46 Q96GE6 NM_033429.2GENCODE basic
ENST00000354678.3CALML4-00761188aaENSP00000456532.1
 
Protein coding
H3BS46 -CDS 3' incomplete
ENST00000478113.1CALML4-004365129aaENSP00000432629.1
 
Nonsense mediated decay
H3BM27 NM_001286695.1CDS 5' incomplete
ENST00000395463.2CALML4-005144560aaENSP00000435285.1
 
Nonsense mediated decay
H3BM29 --
ENST00000467188.1CALML4-006620No protein-
 
Retained intron
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Statistics

Exons: 4, Coding exons: 4, Transcript length: 2,520 bps, Translation length: 149 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96GE6

CCDS

This transcript is a member of the Human CCDS set: CCDS42052

Version

ENST00000448060.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Stop codons

This transcript has a variant, rs11071990, that causes a stop codon to be gained in at least 10% of HapMap or 1000 Genome population(s) CSHL-HAPMAP:HAPMAP-ASW, CSHL-HAPMAP:HapMap-YRI, CSHL-HAPMAP:HAPMAP-MKK, CSHL-HAPMAP:HAPMAP-LWK, ESP6500:African_American.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:
OTTHUMT00000313446 (version 2)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.