Human (GRCh37.p13)
Description

calmodulin-like 4 [Source:HGNC Symbol;Acc:18445]

Gene Synonyms

MGC4809, NY-BR-20

Location
About this transcript

This transcript has 4 exons, is associated with 6085 variant alleles and maps to 370 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeqFlags
ENST00000395465.3CALML4-002415559aaENSP00000378848.3
 
Protein coding
Q6MZY3 -GENCODE basic
ENST00000448060.2CALML4-0032520149aaENSP00000400755.2
 
Protein coding
CCDS42052Q96GE6 NM_001031733.2GENCODE basic
ENST00000540479.1CALML4-2011445120aaENSP00000438177.1
 
Protein coding
CCDS66808H3BS46 Q96GE6 NM_001286694.1GENCODE basic
ENST00000467889.1CALML4-001987196aaENSP00000419081.1
 
Protein coding
CCDS10226H3BS46 Q96GE6 NM_033429.2GENCODE basic
ENST00000354678.3CALML4-00761188aaENSP00000456532.1
 
Protein coding
H3BS46 -CDS 3' incomplete
ENST00000478113.1CALML4-004365129aaENSP00000432629.1
 
Nonsense mediated decay
H3BM27 NM_001286695.1CDS 5' incomplete
ENST00000395463.2CALML4-005144560aaENSP00000435285.1
 
Nonsense mediated decay
H3BM29 --
ENST00000467188.1CALML4-006620No protein-
 
Retained intron
---
Statistics

Exons: 4, Coding exons: 2, Transcript length: 1,445 bps, Translation length: 60 residues

Version

ENST00000395463.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Stop codons

This transcript has a variant, rs11071990, that causes a stop codon to be gained in at least 10% of HapMap or 1000 Genome population(s) CSHL-HAPMAP:HAPMAP-ASW, CSHL-HAPMAP:HapMap-YRI, CSHL-HAPMAP:HAPMAP-MKK, ESP6500:African_American, CSHL-HAPMAP:HAPMAP-LWK.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
OTTHUMT00000313448 (version 4)