Transcript: ENST00000407559.3 WDR60-001

Description

WD repeat domain 60 [Source:HGNC Symbol;Acc:21862]

Gene Synonyms

FAP163, FLJ10300, SRPS6

Location

About this transcript

This transcript has 25 exons, is annotated with 22 domains and features, is associated with 46948 variant alleles and maps to 695 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000407559.3	WDR60-001	3769	1066aa	ENSP00000384290.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47757	A4D230 H7C1E8 Q8WVS4	NM_018051.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397143.2	WDR60-004	457	152aa	ENSP00000380330.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7BYQ2	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000444851.1	WDR60-002	2769	522aa	ENSP00000392608.1	Nonsense mediated decay		H7C022	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000454771.1	WDR60-005	812	196aa	ENSP00000399971.1	Nonsense mediated decay		H7C1E8	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000467220.1	WDR60-003	5410	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 25, Coding exons: 25, Transcript length: 3,769 bps, Translation length: 1,066 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8WVS4

CCDS

This transcript is a member of the Human CCDS set: CCDS47757

Version

ENST00000407559.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000322668 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.