Transcript: ENST00000368069.3 COPA-001

Description

coatomer protein complex, subunit alpha [Source:HGNC Symbol;Acc:2230]

Gene Synonyms

HEP-COP

Location

Chromosome 1: 160,259,063-160,313,038 reverse strand.

About this transcript

This transcript has 33 exons, is annotated with 34 domains and features, is associated with 22125 variant alleles and maps to 1026 oligo probes.

Gene

This transcript is a product of gene ENSG00000122218.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000241704.7	COPA-002	4789	1224aa	ENSP00000241704.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1202	P53621	NM_004371.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000368069.3	COPA-001	4664	1233aa	ENSP00000357048.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41424	P53621	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000545284.1	COPA-004	879	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000541366.1	COPA-003	616	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000481522.1	COPA-007	578	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000481040.1	COPA-006	578	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000545266.1	COPA-005	574	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 33, Coding exons: 33, Transcript length: 4,664 bps, Translation length: 1,233 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P53621

CCDS

This transcript is a member of the Human CCDS set: CCDS41424

Version

ENST00000368069.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000080637 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000368069.3 COPA-001

Summary