Transcript: ENST00000476905.2 SSX2IP-002

Description

synovial sarcoma, X breakpoint 2 interacting protein [Source:HGNC Symbol;Acc:16509]

Gene Synonyms

ADIP, KIAA0923

Location

Chromosome 1: 85,113,024-85,156,440 reverse strand.

About this transcript

This transcript has 16 exons, is annotated with 12 domains and features, is associated with 18944 variant alleles and maps to 429 oligo probes.

Gene

This transcript is a product of gene ENSG00000117155.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000437941.2	SSX2IP-202	5843	587aa	ENSP00000412781.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53337	Q9Y2D8	NM_001166417.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000342203.3	SSX2IP-001	5835	614aa	ENSP00000340279.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS699	C9JIX7 Q9Y2D8	NM_014021.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000370612.4	SSX2IP-201	1959	560aa	ENSP00000359644.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JIX7 Q9Y2D8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000605755.1	SSX2IP-008	1933	587aa	ENSP00000474480.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53337	Q9Y2D8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000603677.1	SSX2IP-009	1149	87aa	ENSP00000473763.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		S4R2Y6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000422026.1	SSX2IP-007	759	180aa	ENSP00000416067.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JIX7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000481102.1	SSX2IP-006	2457	560aa	ENSP00000432261.1	Nonsense mediated decay		C9JIX7 Q9Y2D8	-	-
ENST00000476905.2	SSX2IP-002	2272	504aa	ENSP00000474925.1	Nonsense mediated decay		S4R403	-	-
ENST00000460500.1	SSX2IP-003	2116	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000490476.1	SSX2IP-004	716	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000459708.1	SSX2IP-005	453	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 16, Coding exons: 12, Transcript length: 2,272 bps, Translation length: 504 residues

Version

ENST00000476905.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000027470 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000476905.2 SSX2IP-002

Summary