Transcript: ACTR3-002 ENST00000478928.1

Description

ARP3 actin-related protein 3 homolog (yeast) [Source:HGNC Symbol;Acc:170]

Gene Synonyms

ARP3

Location

Chromosome 2: 114,708,401-114,716,166 forward strand.

About this transcript

This transcript has 3 exons, is associated with 1998 variant alleles and maps to 406 oligo probes.

Gene

This transcript is a product of gene ENSG00000115091.7 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ACTR3-001	ENST00000263238.2	6718	418aa	ENSP00000263238.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33277	B4DTI0 B4DXW1 P61158	NM_005721 NP_005712	The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic,
ACTR3-008	ENST00000535589.2	1530	367aa	ENSP00000444987.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS63000	B4DTI0 B4DXW1	NM_001277140 NP_001264069	The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic,
ACTR3-201	ENST00000536059.1	1417	356aa	ENSP00000445257.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	B4DTI0 F5H3P5	-	The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic,
ACTR3-005	ENST00000446821.1	818	41aa	ENSP00000394213.1	Nonsense mediated decay	-	F8WE84	-	-
ACTR3-004	ENST00000415792.1	676	34aa	ENSP00000407912.1	Nonsense mediated decay	-	F8WEW2	-	-
ACTR3-003	ENST00000443297.1	566	18aa	ENSP00000403125.1	Nonsense mediated decay	-	F8WDR7	-	-
ACTR3-002	ENST00000478928.1	5965	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-	-
ACTR3-007	ENST00000484165.1	676	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-	-
ACTR3-006	ENST00000489779.1	545	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 5,965 bps,

Version

ENST00000478928.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000331367 (version 1)

Favourite species

All species

Recent locations

Transcript: ACTR3-002 ENST00000478928.1

Summary

Transcript-based displays