Transcript: ENST00000423353.1 TBP-003

Description

TATA box binding protein [Source:HGNC Symbol;Acc:11588]

Gene Synonyms

GTF2D, GTF2D1, HDL4, SCA17, TF2D, TFIID

Location

Chromosome 6: 170,863,693-170,871,276 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 6 domains and features, is associated with 3519 variant alleles and maps to 238 oligo probes.

Gene

This transcript is a product of gene ENSG00000112592.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000392092.2	TBP-201	1903	339aa	ENSP00000375942.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5315	B4DPC1 C0LUL1 D2CT63 D2CT64 D2CT65 D2CT66 P20226 Q32MN7 Q7Z6S4 Q7Z6S5	NM_003194.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000230354.6	TBP-001	1861	339aa	ENSP00000230354.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5315	B4DPC1 C0LUL1 D2CT63 D2CT64 D2CT65 D2CT66 P20226 Q32MN7 Q7Z6S4 Q7Z6S5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540980.1	TBP-202	1701	319aa	ENSP00000442132.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55077	P20226	NM_001172085.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000421512.1	TBP-004	935	208aa	ENSP00000400008.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C0LUL1 D2CT63 D2CT64 D2CT65 D2CT66 Q7Z6S4 Q7Z6S5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000446829.1	TBP-002	892	101aa	ENSP00000404905.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000423353.1	TBP-003	703	150aa	ENSP00000416482.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D2CT63 D2CT64 D2CT65 D2CT66 Q7Z6S4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 703 bps, Translation length: 150 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000423353.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000043273 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000423353.1 TBP-003

Summary