Transcript: ENST00000515420.1 CLCN3-009

Description

chloride channel, voltage-sensitive 3 [Source:HGNC Symbol;Acc:2021]

Gene Synonyms

CLC3, ClC-3

Location

Chromosome 4: 170,616,782-170,628,039 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 20 domains and features, is associated with 4561 variant alleles and maps to 95 oligo probes.

Gene

This transcript is a product of gene ENSG00000109572.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000513761.1	CLCN3-001	6692	818aa	ENSP00000424603.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34101	D6RDZ6 D6RIX3 P51790	NM_001829.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000347613.4	CLCN3-002	3635	866aa	ENSP00000261514.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34100	D6RDZ6 D6RIX3 P51790	NM_173872.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000360642.3	CLCN3-004	3208	791aa	ENSP00000353857.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58932	D6RDZ6 D6RIX3 P51790	NM_001243372.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000504131.2	CLCN3-201	3157	801aa	ENSP00000424540.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B9EGJ9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000507875.1	CLCN3-005	2485	725aa	ENSP00000425323.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PE15	NM_001243374.1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000515420.1	CLCN3-009	735	245aa	ENSP00000422678.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000511092.1	CLCN3-006	582	173aa	ENSP00000425160.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RDZ6 D6RIX3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000512813.1	CLCN3-007	563	138aa	ENSP00000425823.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RIX3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000506924.1	CLCN3-008	567	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000502998.1	CLCN3-010	493	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 735 bps, Translation length: 245 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENST00000515420.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000363294 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000515420.1 CLCN3-009

Summary