Transcript: ENST00000225402.5 AATF-001

Description

apoptosis antagonizing transcription factor [Source:HGNC Symbol;Acc:19235]

Gene Synonyms

CHE-1, CHE1, DED

Location

Chromosome 17: 35,306,175-35,414,171 forward strand.

About this transcript

This transcript has 12 exons, is annotated with 9 domains and features, is associated with 43746 variant alleles and maps to 495 oligo probes.

Gene

This transcript is a product of gene ENSG00000108270.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000225402.5	AATF-001	2141	560aa	ENSP00000225402.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32632	K7ERC2 Q9NY61	NM_012138.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000589579.1	AATF-006	601	154aa	ENSP00000468195.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ERC2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000593084.1	AATF-007	502	98aa	ENSP00000465512.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000592751.1	AATF-005	648	55aa	ENSP00000466918.1	Nonsense mediated decay		K7ENE9	-	-
ENST00000590321.1	AATF-003	507	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000587618.1	AATF-004	376	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000586981.1	AATF-002	2044	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000592219.1	AATF-009	586	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000588486.1	AATF-008	474	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 2,141 bps, Translation length: 560 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NY61

CCDS

This transcript is a member of the Human CCDS set: CCDS32632

Version

ENST00000225402.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000451543 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000225402.5 AATF-001

Summary