Transcript: ENST00000262623.3 ATP4A-001

Description

ATPase, H+/K+ exchanging, alpha polypeptide [Source:HGNC Symbol;Acc:819]

Gene Synonyms

ATP6A

Location

About this transcript

This transcript has 22 exons, is annotated with 53 domains and features, is associated with 7171 variant alleles and maps to 658 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000262623.3	ATP4A-001	3709	1035aa	ENSP00000262623.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12467	P20648	NM_000704.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000592767.2	ATP4A-004	650	34aa	ENSP00000472323.2	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000592131.1	ATP4A-002	1912	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000590916.1	ATP4A-003	449	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 22, Coding exons: 22, Transcript length: 3,709 bps, Translation length: 1,035 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P20648

CCDS

This transcript is a member of the Human CCDS set: CCDS12467

Version

ENST00000262623.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000109470 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.