Transcript: ENST00000412908.2 PSMA3-002

Description

proteasome (prosome, macropain) subunit, alpha type, 3 [Source:HGNC Symbol;Acc:9532]

Gene Synonyms

HC8, PSC3, PSC8

Location

Chromosome 14: 58,711,595-58,738,730 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 10 domains and features, is associated with 13173 variant alleles and maps to 477 oligo probes.

Gene

This transcript is a product of gene ENSG00000100567.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000216455.4	PSMA3-001	970	255aa	ENSP00000216455.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9731	G3V4X5 P25788	NM_152132.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000412908.2	PSMA3-002	908	248aa	ENSP00000390491.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45113	P25788	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000557508.1	PSMA3-013	814	180aa	ENSP00000452056.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V4X5	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000553677.1	PSMA3-007	363	83aa	ENSP00000450573.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YJ03	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000557087.1	PSMA3-012	654	36aa	ENSP00000451461.1	Nonsense mediated decay		G3V3W4	-	-
ENST00000555931.1	PSMA3-011	606	54aa	ENSP00000452437.1	Nonsense mediated decay		G3V5N4	-	-
ENST00000554456.1	PSMA3-014	435	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000554812.1	PSMA3-006	1279	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000553665.1	PSMA3-008	925	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000557290.1	PSMA3-004	730	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000555743.1	PSMA3-016	640	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000554207.1	PSMA3-005	570	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000556321.1	PSMA3-015	500	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 908 bps, Translation length: 248 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P25788

CCDS

This transcript is a member of the Human CCDS set: CCDS45113

Version

ENST00000412908.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000411546 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000412908.2 PSMA3-002

Summary