Transcript: ENST00000399839.1 CECR1-002

Description

cat eye syndrome chromosome region, candidate 1 [Source:HGNC Symbol;Acc:1839]

Gene Synonyms

ADA2, ADGF, IDGFL

Location

Chromosome 22: 17,660,194-17,702,879 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 10 domains and features, is associated with 20118 variant alleles and maps to 464 oligo probes.

Gene

This transcript is a product of gene ENSG00000093072.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000399839.1	CECR1-002	3986	511aa	ENSP00000382733.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13742	B4DHM2 B4E3Q4 C9IZA8 F5H7J3 Q9NZK5	NM_001282228.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000262607.3	CECR1-003	3925	511aa	ENSP00000262607.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13742	B4DHM2 B4E3Q4 C9IZA8 F5H7J3 Q9NZK5	NM_017424.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000330232.4	CECR1-004	3195	270aa	ENSP00000332871.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13743	Q9NZK5	NM_177405.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000449907.2	CECR1-202	2072	469aa	ENSP00000406443.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS63395	B4DHM2 B4E3Q4	NM_001282227.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000399837.2	CECR1-201	1603	511aa	ENSP00000382731.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13742	B4DHM2 B4E3Q4 C9IZA8 F5H7J3 Q9NZK5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000441548.1	CECR1-005	581	135aa	ENSP00000392078.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9IZA8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000543038.1	CECR1-001	549	152aa	ENSP00000442482.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9IZA8 F5H7J3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000480276.1	CECR1-006	570	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000469063.1	CECR1-007	510	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 3,986 bps, Translation length: 511 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NZK5

CCDS

This transcript is a member of the Human CCDS set: CCDS13742

Version

ENST00000399839.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000316079 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000399839.1 CECR1-002

Summary