Transcript: ENST00000265724.3 ABCB1-001

Description

ATP-binding cassette, sub-family B (MDR/TAP), member 1 [Source:HGNC Symbol;Acc:40]

Gene Synonyms

ABC20, CD243, CLCS, GP170, MDR1, P-GP, P-gp, PGY1

Location

Chromosome 7: 87,133,175-87,342,564 reverse strand.

About this transcript

This transcript has 29 exons, is annotated with 37 domains and features, is associated with 90780 variant alleles and maps to 1200 oligo probes.

Gene

This transcript is a product of gene ENSG00000085563.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000265724.3	ABCB1-001	4645	1280aa	ENSP00000265724.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5608	A4D1D2 B5U2G4 E7EWT8 P08183 Q6TBL4	NM_000927.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543898.1	ABCB1-201	3651	1216aa	ENSP00000444095.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B5AK60 B5U2G4 E7EWT8 Q6TBL4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000416177.1	ABCB1-003	461	48aa	ENSP00000399419.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EWT8 Q6TBL4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000488737.2	ABCB1-007	1864	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000496821.1	ABCB1-006	913	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000475929.1	ABCB1-009	787	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000476862.1	ABCB1-004	582	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000483831.1	ABCB1-008	642	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000482527.1	ABCB1-005	555	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000491360.1	ABCB1-010	539	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 29, Coding exons: 27, Transcript length: 4,645 bps, Translation length: 1,280 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P08183

CCDS

This transcript is a member of the Human CCDS set: CCDS5608

Version

ENST00000265724.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000335444 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000265724.3 ABCB1-001

Summary