Transcript: ENST00000196371.5 OXCT1-001

Description

3-oxoacid CoA transferase 1 [Source:HGNC Symbol;Acc:8527]

Gene Synonyms

OXCT, SCOT

Location

Chromosome 5: 41,730,167-41,870,621 reverse strand.

About this transcript

This transcript has 17 exons, is annotated with 17 domains and features, is associated with 54907 variant alleles and maps to 645 oligo probes.

Gene

This transcript is a product of gene ENSG00000083720.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000196371.5	OXCT1-001	3388	520aa	ENSP00000196371.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3937	A1E286 B7Z528 P55809	NM_000436.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000512084.1	OXCT1-004	1593	123aa	ENSP00000421143.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z528	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000510634.1	OXCT1-003	1441	123aa	ENSP00000423144.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z528	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000509987.1	OXCT1-002	1441	334aa	ENSP00000425348.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z528 E9PDW2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000513081.1	OXCT1-005	350	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000514723.1	OXCT1-008	241	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000508557.1	OXCT1-006	596	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000503374.1	OXCT1-007	364	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 17, Coding exons: 17, Transcript length: 3,388 bps, Translation length: 520 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P55809

CCDS

This transcript is a member of the Human CCDS set: CCDS3937

Version

ENST00000196371.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000211594 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000196371.5 OXCT1-001

Summary