Transcript: ENST00000344548.3 CDC42-001

Description

cell division cycle 42 [Source:HGNC Symbol;Acc:1736]

Gene Synonyms

CDC42Hs, G25K

Location

Chromosome 1: 22,379,161-22,419,437 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 15 domains and features, is associated with 19387 variant alleles and maps to 565 oligo probes.

Gene

This transcript is a product of gene ENSG00000070831.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000344548.3	CDC42-001	2254	191aa	ENSP00000341072.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS221	P60953 Q5JYX0 Q9UJM0 Q9UJM1	NM_001039802.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000400259.1	CDC42-201	2148	191aa	ENSP00000383118.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS221	P60953 Q5JYX0 Q9UJM0 Q9UJM1	NM_001791.3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000315554.8	CDC42-002	1452	191aa	ENSP00000314458.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS222	P60953 Q5JYX0 Q9UJM0 Q9UJM1	NM_044472.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000421089.2	CDC42-202	1106	233aa	ENSP00000398592.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7ETU3	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000411827.1	CDC42-004	597	136aa	ENSP00000398327.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5JYX0 Q9UJM0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000498236.1	CDC42-003	816	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 5, Transcript length: 2,254 bps, Translation length: 191 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P60953

CCDS

This transcript is a member of the Human CCDS set: CCDS221

Version

ENST00000344548.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000007787 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000344548.3 CDC42-001

Summary