Transcript: ENST00000587024.1 SBNO2-002

Description

strawberry notch homolog 2 (Drosophila) [Source:HGNC Symbol;Acc:29158]

Gene Synonyms

FLJ00173, KIAA0963, SNO, STNO, Sno, Stno

Location

Chromosome 19: 1,107,640-1,174,255 reverse strand.

About this transcript

This transcript has 32 exons, is annotated with 16 domains and features, is associated with 43603 variant alleles and maps to 849 oligo probes.

Gene

This transcript is a product of gene ENSG00000064932.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000361757.3	SBNO2-001	4922	1366aa	ENSP00000354733.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45894	K7ENA9 K7ERL2 Q9Y2G9	NM_014963.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000587024.1	SBNO2-002	4861	1356aa	ENSP00000468520.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ENA9 K7ERL2 K7ES28	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000438103.2	SBNO2-003	4532	1309aa	ENSP00000400762.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45895	Q9Y2G9	NM_001100122.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000587655.1	SBNO2-011	711	111aa	ENSP00000468302.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ERL2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000590998.1	SBNO2-012	562	128aa	ENSP00000468534.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ENA9 K7ERL2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000590176.1	SBNO2-010	561	128aa	ENSP00000466861.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ENA9 K7ERL2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000592222.1	SBNO2-005	2403	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000587673.1	SBNO2-014	1282	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000590446.1	SBNO2-013	577	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000586109.1	SBNO2-015	465	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 32, Coding exons: 31, Transcript length: 4,861 bps, Translation length: 1,356 residues

Version

ENST00000587024.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000458060 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000587024.1 SBNO2-002

Summary