Transcript: ADAMTS6-003 ENST00000470597.1

Description

ADAM metallopeptidase with thrombospondin type 1 motif, 6 [Source:HGNC Symbol;Acc:222]

Gene Synonyms

ADAM-TS 6, ADAM-TS6, ADAMTS-6

Location

Chromosome 5: 64,510,225-64,769,521 reverse strand.

About this transcript

This transcript has 18 exons, is associated with 61018 variant alleles and maps to 500 oligo probes.

Gene

This transcript is a product of gene ENSG00000049192.10 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ADAMTS6-007	ENST00000381055.3	7311	1117aa	ENSP00000370443.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3983	Q5IR90 Q9UKP5	NM_197941 NP_922932	-
ADAMTS6-009	ENST00000464680.2	2742	908aa	ENSP00000423551.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	D6R9L6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ADAMTS6-201	ENST00000536360.1	2221	468aa	ENSP00000440995.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	Q9UKP5	-	The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic,
ADAMTS6-008	ENST00000381052.4	6956	292aa	ENSP00000424377.1	Nonsense mediated decay	-	Q9UKP5	-	-
ADAMTS6-006	ENST00000314351.5	1322	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-	-
ADAMTS6-012	ENST00000417396.2	550	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-	-
ADAMTS6-011	ENST00000504282.1	350	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-	-
ADAMTS6-003	ENST00000470597.1	2850	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-	-
ADAMTS6-010	ENST00000502886.1	1237	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-	-

Summary

Statistics

Exons: 18, Coding exons: 0, Transcript length: 2,850 bps,

Version

ENST00000470597.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000157331 (version 4)

Favourite species

All species

Recent locations

Transcript: ADAMTS6-003 ENST00000470597.1

Summary

Transcript-based displays