Transcript: ENST00000222388.2 ABCF2-003

Description

ATP-binding cassette, sub-family F (GCN20), member 2 [Source:HGNC Symbol;Acc:71]

Gene Synonyms

ABC28, EST133090, HUSSY-18, HUSSY18, M-ABC1

Location

About this transcript

This transcript has 16 exons, is annotated with 20 domains and features, is associated with 9006 variant alleles and maps to 523 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000287844.2	ABCF2-001	3546	623aa	ENSP00000287844.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5923	C9JHK9 C9JZV3 Q9UG63	NM_007189.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000222388.2	ABCF2-003	2185	634aa	ENSP00000222388.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5922	C9JHK9 C9JZV3 Q75MJ1	NM_005692.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000468073.1	ABCF2-006	1031	287aa	ENSP00000419720.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JHK9 C9JZV3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000441774.1	ABCF2-004	941	240aa	ENSP00000395785.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JHK9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000473874.1	ABCF2-007	648	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477252.1	ABCF2-005	249	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 16, Coding exons: 15, Transcript length: 2,185 bps, Translation length: 634 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS5922

Version

ENST00000222388.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000336088 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.