Transcript: ENST00000374391.2 ALOX5-001

Description

arachidonate 5-lipoxygenase [Source:HGNC Symbol;Acc:435]

Gene Synonyms

5-LO, 5-LOX, 5LPG, LOG5

Location

About this transcript

This transcript has 14 exons, is annotated with 25 domains and features, is associated with 32467 variant alleles and maps to 661 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000374391.2	ALOX5-001	2504	674aa	ENSP00000363512.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7212	E5FPY7 P09917	NM_001256153.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542434.1	ALOX5-201	2178	617aa	ENSP00000437634.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58078	E5FPY7 P09917	NM_001256154.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000493336.1	ALOX5-005	636	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000498461.1	ALOX5-002	604	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000481117.1	ALOX5-006	514	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000475300.1	ALOX5-004	446	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000483623.2	ALOX5-003	363	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 2,504 bps, Translation length: 674 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P09917

CCDS

This transcript is a member of the Human CCDS set: CCDS7212

Version

ENST00000374391.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000047780 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.