Transcript: ENST00000265723.4 ABCB4-002

Description

ATP-binding cassette, sub-family B (MDR/TAP), member 4 [Source:HGNC Symbol;Acc:45]

Gene Synonyms

ABC21, GBD1, ICP3, MDR2, MDR2/3, MDR3, PFIC-3, PGY3

Location

Chromosome 7: 87,031,365-87,105,055 reverse strand.

About this transcript

This transcript has 28 exons, is annotated with 38 domains and features, is associated with 29719 variant alleles and maps to 817 oligo probes.

Gene

This transcript is a product of gene ENSG00000005471.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000265723.4	ABCB4-002	4020	1286aa	ENSP00000265723.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5606	A7J1Q4 A7J1S1 A7J1S3 A8HT68 E7EQI1 I7CAJ8 I7CY13 I7D7J8 P21439 Q75MQ5	NM_018849.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000359206.3	ABCB4-001	3923	1279aa	ENSP00000352135.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5605	A7J1Q4 A7J1S1 A7J1S3 A8HT68 E7EQI1 I7CAJ8 I7CY13 I7D7J8 P21439 Q75MQ5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000545634.1	ABCB4-202	3840	1279aa	ENSP00000437465.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5605	A7J1Q4 A7J1S1 A7J1S3 A8HT68 E7EQI1 I7CAJ8 I7CY13 I7D7J8 P21439 Q75MQ5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000358400.3	ABCB4-201	3826	1232aa	ENSP00000351172.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5607	A7J1Q4 A7J1S1 A7J1S3 A8HT68 E7EQI1 I7CAJ8 I7CY13 I7D7J8 P21439 Q75MQ5	NM_018850.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000453593.1	ABCB4-009	3699	1232aa	ENSP00000392983.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5607	A7J1Q4 A7J1S1 A7J1S3 A8HT68 E7EQI1 I7CAJ8 I7CY13 I7D7J8 P21439 Q75MQ5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000417608.1	ABCB4-003	2007	61aa	ENSP00000394511.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EQI1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000440025.1	ABCB4-008	523	99aa	ENSP00000395716.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000473795.1	ABCB4-004	1115	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000467079.1	ABCB4-006	794	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000469770.1	ABCB4-005	746	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000467983.1	ABCB4-007	414	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 28, Coding exons: 27, Transcript length: 4,020 bps, Translation length: 1,286 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P21439

CCDS

This transcript is a member of the Human CCDS set: CCDS5606

Version

ENST00000265723.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000336083 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000265723.4 ABCB4-002

Summary