Transcript: ENST00000403458.4 C16orf86-002

Description

chromosome 16 open reading frame 86 [Source:HGNC Symbol;Acc:33755]

Gene Synonyms

FLJ41802

Location

About this transcript

This transcript has 4 exons, is annotated with 5 domains and features, is associated with 1103 variant alleles and maps to 265 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000403458.4	C16orf86-002	1267	317aa	ENSP00000384117.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32468	Q6ZW13	NM_001012984.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000602365.1	C16orf86-005	677	198aa	ENSP00000473620.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		R4GNF0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000445068.1	C16orf86-001	1314	56aa	ENSP00000400874.1	Nonsense mediated decay		F8WFD6	-	-
ENST00000602974.1	C16orf86-004	463	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000459925.1	C16orf86-003	1719	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000602987.1	C16orf86-006	537	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,267 bps, Translation length: 317 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6ZW13

CCDS

This transcript is a member of the Human CCDS set: CCDS32468

Version

ENST00000403458.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000318767 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.