Transcript: ENST00000326996.6 COL20A1-201

Description

collagen, type XX, alpha 1 [Source:HGNC Symbol;Acc:14670]

Gene Synonyms

KIAA1510, bA261N11.4

Location

Chromosome 20: 61,924,538-61,962,284 forward strand.

About this transcript

This transcript has 37 exons, is annotated with 52 domains and features, is associated with 21711 variant alleles and maps to 752 oligo probes.

Gene

This transcript is a product of gene ENSG00000101203.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000358894.6	COL20A1-006	4172	1284aa	ENSP00000351767.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46628	Q9P218	NM_020882.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000422202.1	COL20A1-001	8097	1297aa	ENSP00000414753.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9P218	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000326996.6	COL20A1-201	4267	1316aa	ENSP00000323077.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9P218	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000435874.1	COL20A1-202	4210	1297aa	ENSP00000408690.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9P218	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000415763.1	COL20A1-004	1204	401aa	ENSP00000410799.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7ZBI4	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000455906.1	COL20A1-009	750	250aa	ENSP00000406345.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7ZBI5	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000496810.1	COL20A1-008	723	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000479501.1	COL20A1-005	4536	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000471582.1	COL20A1-002	1924	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000494913.1	COL20A1-007	1497	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 37, Coding exons: 35, Transcript length: 4,267 bps, Translation length: 1,316 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9P218

Version

ENST00000326996.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000326996.6 COL20A1-201

Summary