Transcript: ENST00000607048.1 CASC15-001

Description

cancer susceptibility candidate 15 (non-protein coding) [Source:HGNC Symbol;Acc:28245]

Gene Synonyms

LINC00340

Location

About this transcript

This transcript has 12 exons, is associated with 237652 variant alleles and maps to 520 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq	Flags
ENST00000605917.1	CASC15-006	4461	No protein	-	lincRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000606197.1	CASC15-004	3969	No protein	-	lincRNA	-	-
ENST00000606851.1	CASC15-003	1889	No protein	-	lincRNA	-	-
ENST00000607048.1	CASC15-001	1634	No protein	-	lincRNA	-	-
ENST00000444265.2	CASC15-002	1497	No protein	-	lincRNA	-	-
ENST00000606336.1	CASC15-005	1288	No protein	-	lincRNA	-	-

Summary

Statistics

Exons: 12, Coding exons: 0, Transcript length: 1,634 bps,

Version

ENST00000607048.1

Type

LincRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000039992 (version 3)