Transcript: ENST00000393708.3 FDX1L-001

Description

ferredoxin 1-like [Source:HGNC Symbol;Acc:30546]

Gene Synonyms

FDX2, MGC19604

Location

Chromosome 19: 10,420,721-10,426,691 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 10 domains and features, is associated with 3405 variant alleles and maps to 434 oligo probes.

Gene

This transcript is a product of gene ENSG00000267673.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000393708.3	FDX1L-001	1012	183aa	ENSP00000377311.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32905	Q6P4F2	NM_001031734.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000541276.1	FDX1L-201	1956	145aa	ENSP00000441093.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EQL1 Q8N8B8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000494368.1	FDX1L-005	584	48aa	ENSP00000467188.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000492239.1	FDX1L-008	773	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000460631.1	FDX1L-007	777	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000453681.1	FDX1L-004	635	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000343376.4	FDX1L-003	614	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000486454.1	FDX1L-006	584	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,012 bps, Translation length: 183 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6P4F2

CCDS

This transcript is a member of the Human CCDS set: CCDS32905

Version

ENST00000393708.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000280567 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000393708.3 FDX1L-001

Summary