Transcript: ENST00000566168.1 HPR-003

Description

haptoglobin-related protein [Source:HGNC Symbol;Acc:5156]

Gene Synonyms

A-259H10.2, HP

Location

Chromosome 16: 72,097,125-72,108,650 forward strand.

About this transcript

This transcript has 3 exons, is associated with 5341 variant alleles and maps to 108 oligo probes.

Gene

This transcript is a product of gene ENSG00000261701.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000540303.2	HPR-001	1244	348aa	ENSP00000441828.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42193	P00739 Q14552	NM_020995.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000228226.8	HPR-201	1158	385aa	ENSP00000228226.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P00739 Q14552	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000356967.5	HPR-202	1077	348aa	ENSP00000349451.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P00739 Q14552	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000561690.1	HPR-002	634	117aa	ENSP00000462916.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KTC3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000566168.1	HPR-003	589	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 589 bps,

Version

ENST00000566168.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000421697 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000566168.1 HPR-003

Summary