Transcript: ENST00000555618.1 FNTB-007

Description

farnesyltransferase, CAAX box, beta [Source:HGNC Symbol;Acc:3785]

Gene Synonyms

FPTB

Location

Chromosome 14: 65,494,105-65,494,499 forward strand.

About this transcript

This transcript has 2 exons, is associated with 182 variant alleles and maps to 55 oligo probes.

Gene

This transcript is a product of gene ENSG00000257365.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000246166.2	FNTB-001	2834	437aa	ENSP00000246166.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9769	B3KSC2 B4DJ86 P49356 Q86TX8	NM_002028.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542227.1	FNTB-202	1847	391aa	ENSP00000443140.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KSC2 B4DJ86 B4E1A0	NM_001202558.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000447296.2	FNTB-201	1468	471aa	ENSP00000406393.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KSC2 B4DJ86 B4DL54	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000555742.1	FNTB-003	725	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000555372.1	FNTB-006	582	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000556709.1	FNTB-005	509	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000554334.1	FNTB-002	2620	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000554210.1	FNTB-004	575	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000557300.1	FNTB-008	530	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000555618.1	FNTB-007	297	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 297 bps,

Version

ENST00000555618.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000414349 (version 1)

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Transcript: ENST00000555618.1 FNTB-007

Summary