Transcript: ENST00000442788.1 PSMA2-001

Description

Proteasome subunit alpha type-2 [Source:UniProtKB/TrEMBL;Acc:H3BT36]

Gene Synonyms

HC3, MU, PMSA2, PSC2, PSC3

Location

About this transcript

This transcript has 9 exons, is annotated with 9 domains and features, is associated with 10322 variant alleles and maps to 670 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000442788.1	PSMA2-001	2430	234aa	ENSP00000455744.1	Nonsense mediated decay	CCDS5467	Q6MZI6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000433579.1	PSMA2-002	1231	48aa	ENSP00000456999.1	Nonsense mediated decay		H3BT36	-	-

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 2,430 bps, Translation length: 234 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS5467

Version

ENST00000442788.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000398997 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.