Transcript: ENST00000555531.1 PSMA1-001

Description

proteasome subunit alpha type-1 isoform 3 [Source:RefSeq peptide;Acc:NP_001137409]

Gene Synonyms

HC2, NU, PROS30, PSC2

Location

About this transcript

This transcript has 12 exons, is annotated with 9 domains and features, is associated with 11755 variant alleles and maps to 424 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000555531.1	PSMA1-001	1221	164aa	ENSP00000457299.1	Nonsense mediated decay		B4DEV8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 12, Coding exons: 7, Transcript length: 1,221 bps, Translation length: 164 residues

Version

ENST00000555531.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000398295 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.