Transcript: ENST00000543226.1 TRAPPC2P1-002

Description

trafficking protein particle complex 2 pseudogene 1 [Source:HGNC Symbol;Acc:10710]

Gene Synonyms

MIP2A, SEDL, SEDLP, SEDLP1, SEDT, TRAPPC2.19, TRAPPC2P1, TRS20, ZNF547, ZNF547L, hYP38334

Location

About this transcript

This transcript has 2 exons, is annotated with 5 domains and features, is associated with 1081 variant alleles and maps to 283 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000543226.1	TRAPPC2P1-002	732	140aa	ENSP00000442778.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFG0 P0DI82 Q6IBE5	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000596755.1	TRAPPC2P1-003	1743	140aa	ENSP00000469888.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFG0 P0DI82 Q6IBE5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 732 bps, Translation length: 140 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P0DI82

Version

ENST00000543226.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000465928 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.