Transcript: ENST00000533518.1 RP11-196G11.1-002

Description

Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:E9PLN8]

Location

About this transcript

This transcript has 13 exons, is annotated with 6 domains and features, is associated with 5617 variant alleles and maps to 513 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq	Flags
ENST00000529564.1	RP11-196G11.1-001	725	166aa	ENSP00000431371.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9PLN8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000532364.1	RP11-196G11.1-003	499	104aa	ENSP00000460316.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3L3B4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000533518.1	RP11-196G11.1-002	2362	121aa	ENSP00000433035.1	Nonsense mediated decay	I3L1P9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 13, Coding exons: 3, Transcript length: 2,362 bps, Translation length: 121 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000533518.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000387748 (version 1)