Transcript: ENST00000521421.1 HOXA10-005

Description

homeobox A10 [Source:HGNC Symbol;Acc:5100]

Gene Synonyms

HOX1, HOX1.8, HOX1H, PL

Location

About this transcript

This transcript has 2 exons, is associated with 778 variant alleles and maps to 362 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000283921.4	HOXA10-001	2541	410aa	ENSP00000283921.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5410	P31260	NM_018951.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396344.4	HOXA10-003	1570	94aa	ENSP00000379633.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P31260	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000521421.1	HOXA10-005	1187	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000524368.1	HOXA10-004	942	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000519593.1	HOXA10-006	723	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 1,187 bps,

Version

ENST00000521421.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000139978 (version 2)